Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SOX2P48431 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SOX2P48431 AC092117.1-201ENST00000621230 3250 ntBASIC12.28□□□□□ -0.44
SOX2P48431 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SOX2P48431 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.27□□□□□ -0.44
SOX2P48431 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SOX2P48431 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.27□□□□□ -0.44
SOX2P48431 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.27□□□□□ -0.44
SOX2P48431 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SOX2P48431 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.27□□□□□ -0.44
SOX2P48431 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SOX2P48431 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SOX2P48431 AP002353.1-201ENST00000528257 1599 ntBASIC12.27□□□□□ -0.44
SOX2P48431 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.27□□□□□ -0.44
SOX2P48431 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SOX2P48431 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SOX2P48431 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.27□□□□□ -0.45
SOX2P48431 OR2R1P-201ENST00000441404 914 ntBASIC12.27□□□□□ -0.45
SOX2P48431 AC012441.2-201ENST00000444843 739 ntBASIC12.27□□□□□ -0.45
SOX2P48431 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.27□□□□□ -0.45
SOX2P48431 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.27□□□□□ -0.45
SOX2P48431 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.27□□□□□ -0.45
SOX2P48431 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.27□□□□□ -0.45
SOX2P48431 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.27□□□□□ -0.45
SOX2P48431 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.27□□□□□ -0.45
SOX2P48431 RHOXF1P1-202ENST00000635473 501 ntBASIC12.27□□□□□ -0.45
SOX2P48431 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SOX2P48431 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SOX2P48431 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SOX2P48431 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.27□□□□□ -0.45
SOX2P48431 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.26□□□□□ -0.45
SOX2P48431 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SOX2P48431 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.26□□□□□ -0.45
SOX2P48431 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
SOX2P48431 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.26□□□□□ -0.45
SOX2P48431 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 GOLGA2P8-201ENST00000505201 779 ntBASIC12.26□□□□□ -0.45
SOX2P48431 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.26□□□□□ -0.45
SOX2P48431 AL160314.3-201ENST00000556041 767 ntBASIC12.26□□□□□ -0.45
SOX2P48431 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.26□□□□□ -0.45
SOX2P48431 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.26□□□□□ -0.45
SOX2P48431 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SOX2P48431 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.26□□□□□ -0.45
SOX2P48431 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms