Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TM4SF4P48230 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 CYP2B7P-201ENST00000541697 1476 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 AP001267.2-201ENST00000532619 2086 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 AC073585.1-201ENST00000368895 1328 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC15.28■□□□□ 0.04
TM4SF4P48230 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC15.28■□□□□ 0.04
TM4SF4P48230 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 HINT1-204ENST00000506908 681 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 NUP210P2-201ENST00000510577 282 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC15.28■□□□□ 0.04
TM4SF4P48230 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC15.28■□□□□ 0.04
TM4SF4P48230 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 U62317.4-201ENST00000609758 448 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 MIR7704-201ENST00000610524 59 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC15.28■□□□□ 0.04
TM4SF4P48230 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC15.28■□□□□ 0.04
TM4SF4P48230 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
TM4SF4P48230 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 FAM183BP-201ENST00000409072 1595 ntBASIC15.28■□□□□ 0.04
TM4SF4P48230 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TM4SF4P48230 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 NBEAP3-201ENST00000420638 1493 ntBASIC15.27■□□□□ 0.04
TM4SF4P48230 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TM4SF4P48230 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.27■□□□□ 0.04
TM4SF4P48230 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TM4SF4P48230 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC15.27■□□□□ 0.04
TM4SF4P48230 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 MBL3P-201ENST00000402234 644 ntBASIC15.27■□□□□ 0.04
TM4SF4P48230 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC15.27■□□□□ 0.04
TM4SF4P48230 AL133551.1-201ENST00000610279 1222 ntBASIC15.27■□□□□ 0.04
TM4SF4P48230 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 BIN3-212ENST00000640731 450 ntTSL 5 BASIC15.27■□□□□ 0.04
TM4SF4P48230 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM4SF4P48230 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM4SF4P48230 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM4SF4P48230 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.27■□□□□ 0.03
TM4SF4P48230 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM4SF4P48230 POM121L14P-201ENST00000406100 1558 ntBASIC15.27■□□□□ 0.03
TM4SF4P48230 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM4SF4P48230 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM4SF4P48230 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TM4SF4P48230 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 TUBB8P5-201ENST00000445286 1351 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms