Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
APOBP04114 SNORA50C-201ENST00000408535 133 ntBASIC8.2□□□□□ -1.1
APOBP04114 RPL19P20-201ENST00000415648 591 ntBASIC8.2□□□□□ -1.1
APOBP04114 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 ALG1L14P-201ENST00000514230 434 ntBASIC8.2□□□□□ -1.1
APOBP04114 OR7E126P-201ENST00000526217 888 ntBASIC8.2□□□□□ -1.1
APOBP04114 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 AL356423.1-201ENST00000604953 538 ntBASIC8.2□□□□□ -1.1
APOBP04114 SNORA50.1-201ENST00000628590 135 ntBASIC8.2□□□□□ -1.1
APOBP04114 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC8.2□□□□□ -1.1
APOBP04114 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 MANEA-AS1-201ENST00000564541 2268 ntBASIC8.2□□□□□ -1.1
APOBP04114 AC012531.1-201ENST00000562848 2680 ntBASIC8.2□□□□□ -1.1
APOBP04114 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 ACTBP1-201ENST00000417985 1113 ntBASIC8.2□□□□□ -1.1
APOBP04114 C2orf27AP2-201ENST00000438438 555 ntBASIC8.2□□□□□ -1.1
APOBP04114 Z93242.2-201ENST00000445666 394 ntBASIC8.2□□□□□ -1.1
APOBP04114 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 AC098591.1-202ENST00000507914 937 ntBASIC8.2□□□□□ -1.1
APOBP04114 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC8.2□□□□□ -1.1
APOBP04114 AC025165.4-201ENST00000602327 433 ntBASIC8.2□□□□□ -1.1
APOBP04114 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 CR383656.2-201ENST00000548656 2254 ntBASIC8.2□□□□□ -1.1
APOBP04114 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 P2RX6P-202ENST00000450626 357 ntBASIC8.2□□□□□ -1.1
APOBP04114 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC8.2□□□□□ -1.1
APOBP04114 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC8.2□□□□□ -1.1
APOBP04114 AC011773.4-202ENST00000566000 1264 ntBASIC8.2□□□□□ -1.1
APOBP04114 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
APOBP04114 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 AC018445.4-201ENST00000624066 2291 ntBASIC8.19□□□□□ -1.1
APOBP04114 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 AC007322.2-201ENST00000414540 605 ntBASIC8.19□□□□□ -1.1
APOBP04114 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC8.19□□□□□ -1.1
APOBP04114 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 AC003072.1-201ENST00000510957 612 ntBASIC8.19□□□□□ -1.1
APOBP04114 OR5BA1P-201ENST00000529722 982 ntBASIC8.19□□□□□ -1.1
APOBP04114 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 MIR4296-201ENST00000581038 88 ntBASIC8.19□□□□□ -1.1
APOBP04114 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC8.19□□□□□ -1.1
APOBP04114 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 LINC00643-207ENST00000637212 734 ntBASIC8.19□□□□□ -1.1
APOBP04114 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 AC107375.1-201ENST00000564464 2231 ntBASIC8.19□□□□□ -1.1
APOBP04114 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 LDHAL6FP-201ENST00000405916 1082 ntBASIC8.19□□□□□ -1.1
APOBP04114 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 AC090950.1-202ENST00000605733 644 ntBASIC8.19□□□□□ -1.1
APOBP04114 AC092471.1-202ENST00000637160 999 ntBASIC8.19□□□□□ -1.1
APOBP04114 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms