Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
KDELR3O43731 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.98□□□□□ -0.17
KDELR3O43731 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 AC041040.1-201ENST00000425197 460 ntBASIC13.98□□□□□ -0.17
KDELR3O43731 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.98□□□□□ -0.17
KDELR3O43731 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.98□□□□□ -0.17
KDELR3O43731 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.98□□□□□ -0.17
KDELR3O43731 RN7SL736P-201ENST00000613111 269 ntBASIC13.98□□□□□ -0.17
KDELR3O43731 AC105137.3-201ENST00000617588 984 ntBASIC13.98□□□□□ -0.17
KDELR3O43731 AC004623.1-201ENST00000624592 2127 ntBASIC13.98□□□□□ -0.17
KDELR3O43731 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KDELR3O43731 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KDELR3O43731 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.98□□□□□ -0.17
KDELR3O43731 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.97□□□□□ -0.17
KDELR3O43731 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.97□□□□□ -0.17
KDELR3O43731 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.97□□□□□ -0.17
KDELR3O43731 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.97□□□□□ -0.17
KDELR3O43731 AC104784.1-201ENST00000473096 294 ntBASIC13.97□□□□□ -0.17
KDELR3O43731 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KDELR3O43731 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.97□□□□□ -0.17
KDELR3O43731 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.97□□□□□ -0.17
KDELR3O43731 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.97□□□□□ -0.17
KDELR3O43731 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.97□□□□□ -0.17
KDELR3O43731 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 AC024075.2-201ENST00000598112 1473 ntBASIC13.97□□□□□ -0.17
KDELR3O43731 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KDELR3O43731 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 AC092115.1-201ENST00000566277 1402 ntBASIC13.97□□□□□ -0.17
KDELR3O43731 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.97□□□□□ -0.17
KDELR3O43731 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KDELR3O43731 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.97□□□□□ -0.17
KDELR3O43731 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDELR3O43731 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDELR3O43731 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDELR3O43731 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDELR3O43731 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KDELR3O43731 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.96□□□□□ -0.17
KDELR3O43731 MSNP1-201ENST00000511640 1732 ntBASIC13.96□□□□□ -0.17
KDELR3O43731 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.96□□□□□ -0.17
KDELR3O43731 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KDELR3O43731 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.96□□□□□ -0.17
KDELR3O43731 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.96□□□□□ -0.17
KDELR3O43731 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms