Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 FMO6P-201ENST00000236166 1620 ntBASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 FKBP4P8-201ENST00000610931 1369 ntBASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 AC106827.1-201ENST00000366454 431 ntBASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 MIR566-201ENST00000385187 94 ntBASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRIT1Q9P2V4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 COX20P1-201ENST00000366529 357 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC041040.1-201ENST00000425197 460 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AK2P2-201ENST00000439142 405 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC079250.1-201ENST00000456046 531 ntBASIC13.34□□□□□ -0.27
LRIT1Q9P2V4 AC244197.1-201ENST00000456494 951 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms