Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.75□□□□□ -0.53
SSBP1Q04837 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.75□□□□□ -0.53
SSBP1Q04837 CHMP1AP1-201ENST00000445563 662 ntBASIC11.75□□□□□ -0.53
SSBP1Q04837 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.75□□□□□ -0.53
SSBP1Q04837 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 AC133540.1-201ENST00000620845 1019 ntBASIC11.75□□□□□ -0.53
SSBP1Q04837 AC093028.1-201ENST00000622998 982 ntBASIC11.75□□□□□ -0.53
SSBP1Q04837 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.75□□□□□ -0.53
SSBP1Q04837 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 AL645937.6-201ENST00000641122 3727 ntBASIC11.75□□□□□ -0.53
SSBP1Q04837 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.75□□□□□ -0.53
SSBP1Q04837 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
SSBP1Q04837 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSBP1Q04837 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.74□□□□□ -0.53
SSBP1Q04837 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 PMS2P2-201ENST00000425039 1128 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.74□□□□□ -0.53
SSBP1Q04837 AC007279.1-201ENST00000448547 837 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 KRT17P7-201ENST00000451704 1104 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.74□□□□□ -0.53
SSBP1Q04837 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.74□□□□□ -0.53
SSBP1Q04837 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.74□□□□□ -0.53
SSBP1Q04837 MIR3940-201ENST00000579148 102 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 AC139530.3-201ENST00000620344 690 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 AC006453.4-201ENST00000636949 1252 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SSBP1Q04837 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.74□□□□□ -0.53
SSBP1Q04837 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.74□□□□□ -0.53
SSBP1Q04837 AL162615.1-201ENST00000429893 1653 ntBASIC11.74□□□□□ -0.53
SSBP1Q04837 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSBP1Q04837 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.74□□□□□ -0.53
SSBP1Q04837 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms