Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.13□□□□□ -0.31
RAE1P78406 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.12□□□□□ -0.31
RAE1P78406 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RAE1P78406 AL583805.1-201ENST00000391389 531 ntBASIC13.12□□□□□ -0.31
RAE1P78406 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.12□□□□□ -0.31
RAE1P78406 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.12□□□□□ -0.31
RAE1P78406 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.12□□□□□ -0.31
RAE1P78406 AC005077.2-201ENST00000449786 690 ntBASIC13.12□□□□□ -0.31
RAE1P78406 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.12□□□□□ -0.31
RAE1P78406 AC242376.1-201ENST00000559033 726 ntBASIC13.12□□□□□ -0.31
RAE1P78406 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.12□□□□□ -0.31
RAE1P78406 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.12□□□□□ -0.31
RAE1P78406 SIGLEC18P-201ENST00000602271 909 ntBASIC13.12□□□□□ -0.31
RAE1P78406 AC007326.1-201ENST00000604539 458 ntBASIC13.12□□□□□ -0.31
RAE1P78406 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.12□□□□□ -0.31
RAE1P78406 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 Z98257.2-202ENST00000641138 1548 ntBASIC13.12□□□□□ -0.31
RAE1P78406 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
RAE1P78406 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAE1P78406 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 AC007326.2-201ENST00000624224 7579 ntBASIC13.11□□□□□ -0.31
RAE1P78406 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 FAM90A2P-201ENST00000511144 1395 ntBASIC13.11□□□□□ -0.31
RAE1P78406 FAM90A25P-201ENST00000528404 1395 ntBASIC13.11□□□□□ -0.31
RAE1P78406 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RAE1P78406 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.11□□□□□ -0.31
RAE1P78406 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.11□□□□□ -0.31
RAE1P78406 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RAE1P78406 AL627231.1-201ENST00000394467 1125 ntBASIC13.11□□□□□ -0.31
RAE1P78406 MIR1307-201ENST00000408840 149 ntBASIC13.11□□□□□ -0.31
RAE1P78406 AL807761.2-201ENST00000422849 729 ntBASIC13.11□□□□□ -0.31
RAE1P78406 AC092573.1-201ENST00000433054 884 ntBASIC13.11□□□□□ -0.31
RAE1P78406 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.11□□□□□ -0.31
RAE1P78406 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.11□□□□□ -0.31
RAE1P78406 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.11□□□□□ -0.31
RAE1P78406 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.11□□□□□ -0.31
RAE1P78406 AP000358.1-201ENST00000456260 156 ntBASIC13.11□□□□□ -0.31
RAE1P78406 FTH1P22-201ENST00000456305 520 ntBASIC13.11□□□□□ -0.31
RAE1P78406 RN7SL67P-201ENST00000492147 296 ntBASIC13.11□□□□□ -0.31
RAE1P78406 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.11□□□□□ -0.31
RAE1P78406 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.11□□□□□ -0.31
RAE1P78406 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.11□□□□□ -0.31
RAE1P78406 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.11□□□□□ -0.31
RAE1P78406 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.11□□□□□ -0.31
RAE1P78406 RN7SL574P-201ENST00000581512 297 ntBASIC13.11□□□□□ -0.31
RAE1P78406 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RAE1P78406 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
RAE1P78406 AC244093.1-201ENST00000610837 814 ntBASIC13.11□□□□□ -0.31
RAE1P78406 AP001505.2-201ENST00000616815 443 ntBASIC13.11□□□□□ -0.31
RAE1P78406 GPR182-203ENST00000622922 591 ntBASIC13.11□□□□□ -0.31
RAE1P78406 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.11□□□□□ -0.31
RAE1P78406 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.11□□□□□ -0.31
RAE1P78406 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
RAE1P78406 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAE1P78406 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms