Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.66□□□□□ -0.38
COX6A1P12074 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC12.66□□□□□ -0.38
COX6A1P12074 RN7SL288P-201ENST00000490496 291 ntBASIC12.66□□□□□ -0.38
COX6A1P12074 RPL29P2-202ENST00000498671 657 ntBASIC12.66□□□□□ -0.38
COX6A1P12074 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.66□□□□□ -0.38
COX6A1P12074 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.66□□□□□ -0.38
COX6A1P12074 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC12.66□□□□□ -0.38
COX6A1P12074 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
COX6A1P12074 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.66□□□□□ -0.38
COX6A1P12074 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
COX6A1P12074 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.66□□□□□ -0.38
COX6A1P12074 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.66□□□□□ -0.38
COX6A1P12074 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.66□□□□□ -0.38
COX6A1P12074 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
COX6A1P12074 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.66□□□□□ -0.38
COX6A1P12074 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
COX6A1P12074 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COX6A1P12074 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 MARK2P9-201ENST00000430958 1727 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
COX6A1P12074 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COX6A1P12074 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COX6A1P12074 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.65□□□□□ -0.38
COX6A1P12074 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.65□□□□□ -0.38
COX6A1P12074 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 AC244197.1-201ENST00000456494 951 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC12.65□□□□□ -0.38
COX6A1P12074 METTL7AP1-201ENST00000547343 496 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.65□□□□□ -0.38
COX6A1P12074 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.65□□□□□ -0.38
COX6A1P12074 AC068831.5-201ENST00000557387 328 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 URAHP-205ENST00000610227 398 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 AC113385.2-201ENST00000614465 762 ntBASIC12.65□□□□□ -0.38
COX6A1P12074 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.65□□□□□ -0.38
COX6A1P12074 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.65□□□□□ -0.38
COX6A1P12074 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COX6A1P12074 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
COX6A1P12074 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
COX6A1P12074 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
COX6A1P12074 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
COX6A1P12074 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COX6A1P12074 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.64□□□□□ -0.39
COX6A1P12074 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COX6A1P12074 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COX6A1P12074 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms