Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMG20BQ9P0W2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMG20BQ9P0W2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMG20BQ9P0W2 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 FUCA1P1-201ENST00000374476 1351 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 DKKL1P1-201ENST00000400550 698 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 SNORA50C-201ENST00000408535 133 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 KRT18P62-201ENST00000446618 1287 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 Z98885.3-201ENST00000624882 1757 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 SNORA50.1-201ENST00000628590 135 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 AC073869.1-201ENST00000415574 2762 ntBASIC16.83■□□□□ 0.28
HMG20BQ9P0W2 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 AC007279.1-201ENST00000448547 837 ntBASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 ALG1L6P-201ENST00000515248 758 ntBASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 LINC00431-202ENST00000636375 159 ntBASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMG20BQ9P0W2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 RPL13AP19-201ENST00000434320 584 ntBASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 AC026410.1-201ENST00000507366 1101 ntBASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms