Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 RN7SL67P-201ENST00000492147 296 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC104758.3-203ENST00000562938 2123 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 MIR3677-201ENST00000578964 60 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC007326.1-201ENST00000604539 458 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC012073.1-201ENST00000606114 1108 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AP001505.2-201ENST00000616815 443 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC009145.4-201ENST00000625119 1294 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC006372.4-201ENST00000624122 1543 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 CICP9-201ENST00000444451 1913 ntBASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 GHET1-201ENST00000627071 1906 ntBASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.52□□□□□ -0.24
PDLIM5Q96HC4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 OR2K2-202ENST00000374428 1038 ntBASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 DKKL1P1-201ENST00000400550 698 ntBASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 AC005077.3-201ENST00000449614 213 ntBASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
PDLIM5Q96HC4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PDLIM5Q96HC4 AC019109.1-201ENST00000401725 1874 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms