Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BEST2Q8NFU1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 RCC2P5-201ENST00000492126 1487 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC025271.4-201ENST00000621477 1726 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC089987.1-201ENST00000551654 2209 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 BAK1P1-201ENST00000317045 636 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 GNG10P1-201ENST00000452289 199 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 AL365181.3-201ENST00000605886 3222 ntBASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BEST2Q8NFU1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms