Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 KRT8P29-201ENST00000420409 1371 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 AC079776.1-201ENST00000401540 1152 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 XBP1P1-201ENST00000436573 652 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 U91328.1-201ENST00000437528 223 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 HSPB1P2-201ENST00000448722 546 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ACA64.2-201ENST00000459014 129 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 AC133552.6-201ENST00000613406 534 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 AC009542.2-202ENST00000619004 1067 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 VENTXP1-201ENST00000569334 2716 ntBASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 SALL4P6-201ENST00000429385 1691 ntBASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 AP000437.1-201ENST00000624057 2085 ntBASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 SHMT1P1-201ENST00000419974 1312 ntBASIC14.77□□□□□ -0.04
CCDC50Q8IVM0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 FAM21FP-201ENST00000426241 1131 ntBASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 Z93015.1-201ENST00000451718 390 ntBASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 HILS1-202ENST00000545329 423 ntBASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC50Q8IVM0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC50Q8IVM0 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms