Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RN7SL788P-201ENST00000460504 316 ntBASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC145285.5-201ENST00000562217 361 ntBASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 NCLP1-201ENST00000445357 1963 ntBASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD3Q7Z3D4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC138761.6-201ENST00000583997 1423 ntBASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 HMGB3P14-201ENST00000494195 599 ntBASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC019193.1-201ENST00000506678 823 ntBASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PRKXP1-201ENST00000561423 1122 ntBASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 MARK2P9-201ENST00000430958 1727 ntBASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD3Q7Z3D4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms