Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC103592.1-201ENST00000394513 664 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC092580.3-201ENST00000430932 139 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AL359711.2-201ENST00000563105 872 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 RRP7BP-205ENST00000566851 833 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 MIR8072-201ENST00000614241 80 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC027601.3-201ENST00000622907 509 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC005252.2-201ENST00000624630 1141 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 KCTD21-AS1-207ENST00000600795 1549 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 AC100757.3-201ENST00000622361 1406 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 FAM90A17P-201ENST00000533716 1957 ntBASIC13.11□□□□□ -0.31
LPCAT4Q643R3 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 REXO1L6P-201ENST00000603433 1515 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AP006288.1-201ENST00000446065 395 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 KLF2P3-201ENST00000451977 1087 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AC004967.1-201ENST00000453589 447 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 KRT18P25-201ENST00000508931 1278 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AC135586.1-201ENST00000539323 574 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AL158211.3-201ENST00000607385 239 ntBASIC13.1□□□□□ -0.31
LPCAT4Q643R3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LPCAT4Q643R3 AC008761.3-201ENST00000624803 892 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms