Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 RNVU1-8-201ENST00000364272 125 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 AC136604.1-202ENST00000425471 771 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 AC005077.3-201ENST00000449614 213 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SUMO3P55854 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.54□□□□□ -0.4
SUMO3P55854 RN7SKP155-201ENST00000516031 288 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.54□□□□□ -0.4
SUMO3P55854 AC007250.1-201ENST00000608934 338 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.54□□□□□ -0.4
SUMO3P55854 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.54□□□□□ -0.4
SUMO3P55854 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.54□□□□□ -0.4
SUMO3P55854 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SUMO3P55854 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
SUMO3P55854 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.53□□□□□ -0.4
SUMO3P55854 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 ACTBP14-201ENST00000411655 1089 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 OR52M2P-201ENST00000414298 959 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 AC073210.1-201ENST00000414799 232 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 KRT18P62-201ENST00000446618 1287 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.53□□□□□ -0.4
SUMO3P55854 NOC2LP1-201ENST00000450578 752 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 AC025186.1-201ENST00000478174 870 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 AC132812.1-201ENST00000583145 892 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.53□□□□□ -0.4
SUMO3P55854 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.53□□□□□ -0.4
SUMO3P55854 AC084781.1-201ENST00000613737 656 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 AC073869.1-201ENST00000415574 2762 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SUMO3P55854 AL365181.3-201ENST00000605886 3222 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SUMO3P55854 LINC00638-201ENST00000555578 2518 ntBASIC12.53□□□□□ -0.4
SUMO3P55854 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SUMO3P55854 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms