Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 TAAR4P-201ENST00000454843 1039 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 GOLGA2P8-201ENST00000505201 779 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 MIR4525-201ENST00000580000 75 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 BNIP3P27-201ENST00000599991 412 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AL049536.1-201ENST00000625043 744 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AC130686.1-201ENST00000622936 2466 ntBASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB13Q9Y5F0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 MTCO1P8-201ENST00000416914 1523 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AL365181.3-201ENST00000605886 3222 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 RNA5SP359-201ENST00000364838 113 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AL354692.1-201ENST00000423044 315 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AL122001.1-201ENST00000457027 370 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AC090857.1-201ENST00000527400 390 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 NDUFV2P1-201ENST00000596415 907 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AC091544.8-201ENST00000619490 361 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AC006927.2-201ENST00000639256 389 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AL928654.5-201ENST00000624831 2501 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AC023794.5-201ENST00000564380 2157 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 AL031595.1-201ENST00000623969 4709 ntBASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB13Q9Y5F0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB13Q9Y5F0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB13Q9Y5F0 BRD7P5-201ENST00000299197 1822 ntBASIC15.68■□□□□ 0.1
PCDHB13Q9Y5F0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB13Q9Y5F0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB13Q9Y5F0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms