Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.15□□□□□ -0.14
HACD3Q9P035 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HACD3Q9P035 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HACD3Q9P035 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HACD3Q9P035 AL731571.1-201ENST00000617058 5428 ntBASIC14.15□□□□□ -0.14
HACD3Q9P035 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HACD3Q9P035 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HACD3Q9P035 KRT8P31-201ENST00000504812 1408 ntBASIC14.15□□□□□ -0.14
HACD3Q9P035 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.15□□□□□ -0.14
HACD3Q9P035 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.15□□□□□ -0.14
HACD3Q9P035 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
HACD3Q9P035 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AC072061.1-201ENST00000569710 2234 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
HACD3Q9P035 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AC067931.2-201ENST00000623655 2003 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HACD3Q9P035 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 PDIA3P2-201ENST00000428073 158 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 AC026320.2-201ENST00000434379 478 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.14□□□□□ -0.15
HACD3Q9P035 ACTG1P17-201ENST00000558391 1119 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.14□□□□□ -0.15
HACD3Q9P035 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AL133467.4-201ENST00000602953 725 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 AL021707.6-201ENST00000609212 491 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 AC015967.2-201ENST00000624092 234 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 AC006435.4-201ENST00000625037 234 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 AL356737.1-201ENST00000634391 234 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AL139424.3-202ENST00000641619 917 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 AL133338.1-201ENST00000565695 1517 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 OR2I1P-208ENST00000641137 4948 ntBASIC14.14□□□□□ -0.15
HACD3Q9P035 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HACD3Q9P035 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.14□□□□□ -0.15
HACD3Q9P035 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HACD3Q9P035 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HACD3Q9P035 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.13□□□□□ -0.15
HACD3Q9P035 FAM90A2P-201ENST00000511144 1395 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 FAM90A25P-201ENST00000528404 1395 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 NUTM2HP-201ENST00000442076 2498 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.13□□□□□ -0.15
HACD3Q9P035 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HACD3Q9P035 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
HACD3Q9P035 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.13□□□□□ -0.15
HACD3Q9P035 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 LINC00265-2P-201ENST00000413372 782 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.13□□□□□ -0.15
HACD3Q9P035 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.13□□□□□ -0.15
HACD3Q9P035 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.13□□□□□ -0.15
HACD3Q9P035 DUTP3-201ENST00000450025 415 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.13□□□□□ -0.15
HACD3Q9P035 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.13□□□□□ -0.15
HACD3Q9P035 MIR4754-201ENST00000582477 89 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HACD3Q9P035 AL109837.1-201ENST00000603272 613 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.13□□□□□ -0.15
HACD3Q9P035 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.13□□□□□ -0.15
HACD3Q9P035 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 FAM90A12P-201ENST00000519497 2375 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 FAM90A24P-201ENST00000520792 2369 ntBASIC14.13□□□□□ -0.15
HACD3Q9P035 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HACD3Q9P035 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.13□□□□□ -0.15
HACD3Q9P035 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HACD3Q9P035 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms