Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 APTX-203ENST00000379813 1121 ntTSL 5 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 RPL19P20-201ENST00000415648 591 ntBASIC21.93■■□□□ 1.1
IFT140Q96RY7 PHBP11-201ENST00000420550 809 ntBASIC21.93■■□□□ 1.1
IFT140Q96RY7 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 AC087893.1-201ENST00000612818 664 ntBASIC21.93■■□□□ 1.1
IFT140Q96RY7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
IFT140Q96RY7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IFT140Q96RY7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 Z98259.1-201ENST00000564261 1697 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC090643.2-201ENST00000623442 2029 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC007322.2-201ENST00000414540 605 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 CNN2P1-201ENST00000453616 918 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC233724.7-201ENST00000511476 253 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC106774.4-201ENST00000600799 409 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC21.92■■□□□ 1.1
IFT140Q96RY7 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT140Q96RY7 BX005132.1-201ENST00000641403 1580 ntBASIC21.92■■□□□ 1.1
IFT140Q96RY7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 RBM14-203ENST00000409372 876 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 ACTBP1-201ENST00000417985 1113 ntBASIC21.91■■□□□ 1.1
IFT140Q96RY7 CYP4F60P-201ENST00000439449 549 ntBASIC21.91■■□□□ 1.1
IFT140Q96RY7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 AC022483.2-201ENST00000461464 555 ntBASIC21.91■■□□□ 1.1
IFT140Q96RY7 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 RPL7AP53-201ENST00000468834 793 ntBASIC21.91■■□□□ 1.1
IFT140Q96RY7 RPL18P1-201ENST00000497218 552 ntBASIC21.91■■□□□ 1.1
IFT140Q96RY7 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 PTMAP5-202ENST00000607242 1162 ntBASIC21.91■■□□□ 1.1
IFT140Q96RY7 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT140Q96RY7 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT140Q96RY7 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT140Q96RY7 LDHAL6FP-201ENST00000405916 1082 ntBASIC21.9■■□□□ 1.1
IFT140Q96RY7 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 LDHAL6CP-201ENST00000502352 1142 ntBASIC21.9■■□□□ 1.1
IFT140Q96RY7 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 EEF1DP8-201ENST00000534760 536 ntBASIC21.9■■□□□ 1.1
IFT140Q96RY7 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT140Q96RY7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IFT140Q96RY7 KRT18P40-201ENST00000599859 1571 ntBASIC21.9■■□□□ 1.1
IFT140Q96RY7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT140Q96RY7 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC21.9■■□□□ 1.1
IFT140Q96RY7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms