Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AL591471.1-201ENST00000621855 229 ntBASIC14.39□□□□□ -0.11
SCG3Q8WXD2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.39□□□□□ -0.11
SCG3Q8WXD2 AHCYP4-201ENST00000419201 1315 ntBASIC14.39□□□□□ -0.11
SCG3Q8WXD2 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 FAM90A7P-201ENST00000382628 1395 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 FAM90A23P-201ENST00000400136 1395 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC078875.1-201ENST00000431907 724 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC003686.1-201ENST00000550956 1034 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC124068.2-201ENST00000569473 1109 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 AC133540.1-201ENST00000620845 1019 ntBASIC14.38□□□□□ -0.11
SCG3Q8WXD2 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SCG3Q8WXD2 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.37□□□□□ -0.11
SCG3Q8WXD2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 AC140658.4-201ENST00000561990 352 ntBASIC14.37□□□□□ -0.11
SCG3Q8WXD2 MIR3907-201ENST00000579424 151 ntBASIC14.37□□□□□ -0.11
SCG3Q8WXD2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.37□□□□□ -0.11
SCG3Q8WXD2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms