Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC20.14■□□□□ 0.82
CDC42BPAQ5VT25 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CDC42BPAQ5VT25 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDC42BPAQ5VT25 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDC42BPAQ5VT25 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.14■□□□□ 0.82
CDC42BPAQ5VT25 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDC42BPAQ5VT25 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC053503.3-201ENST00000448375 114 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 DIS3L2P1-201ENST00000509197 559 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 NUP210P2-201ENST00000510577 282 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC080023.2-201ENST00000532615 208 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC073862.3-201ENST00000624597 1648 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AL365181.3-201ENST00000605886 3222 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC008040.5-201ENST00000599781 1781 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 AC106872.9-201ENST00000512437 1393 ntBASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CDC42BPAQ5VT25 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 SERPINB8P1-201ENST00000401898 377 ntBASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 RN7SL678P-201ENST00000579533 299 ntBASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AL109983.1-201ENST00000603234 646 ntBASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 TCAF1P1-201ENST00000414990 2232 ntBASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 AC112702.1-201ENST00000623712 366 ntBASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42BPAQ5VT25 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 TUBA3GP-201ENST00000410028 1325 ntBASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 CASP2-203ENST00000392925 616 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 AC079325.1-201ENST00000430386 857 ntBASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC20.12■□□□□ 0.81
CDC42BPAQ5VT25 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms