Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 PIGCP1-201ENST00000527583 895 ntBASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AC091304.3-201ENST00000566500 716 ntBASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AL591424.3-201ENST00000614278 872 ntBASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AF013593.1-201ENST00000458074 1487 ntBASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AC024075.2-201ENST00000598112 1473 ntBASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHROOM1Q2M3G4 AC064850.1-201ENST00000413279 1398 ntBASIC16■□□□□ 0.15
SHROOM1Q2M3G4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AC104581.4-201ENST00000623126 3052 ntBASIC16■□□□□ 0.15
SHROOM1Q2M3G4 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 SNORD23-201ENST00000408876 110 ntBASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AC136604.1-202ENST00000425471 771 ntBASIC16■□□□□ 0.15
SHROOM1Q2M3G4 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 RNA5SP420-201ENST00000516997 137 ntBASIC16■□□□□ 0.15
SHROOM1Q2M3G4 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 KRT8P24-201ENST00000560290 1559 ntBASIC16■□□□□ 0.15
SHROOM1Q2M3G4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SHROOM1Q2M3G4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 AC072061.1-201ENST00000569710 2234 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 AC063926.3-201ENST00000624734 5658 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms