Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC20.07■□□□□ 0.8
KDM5CP41229 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC20.07■□□□□ 0.8
KDM5CP41229 AC012100.1-201ENST00000470304 282 ntBASIC20.07■□□□□ 0.8
KDM5CP41229 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KDM5CP41229 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDM5CP41229 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC20.07■□□□□ 0.8
KDM5CP41229 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC20.07■□□□□ 0.8
KDM5CP41229 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC20.07■□□□□ 0.8
KDM5CP41229 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDM5CP41229 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDM5CP41229 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC20.07■□□□□ 0.8
KDM5CP41229 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KDM5CP41229 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDM5CP41229 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDM5CP41229 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KDM5CP41229 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KDM5CP41229 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC20.06■□□□□ 0.8
KDM5CP41229 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KDM5CP41229 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.06■□□□□ 0.8
KDM5CP41229 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KDM5CP41229 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC20.06■□□□□ 0.8
KDM5CP41229 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
KDM5CP41229 AL627095.1-201ENST00000414775 321 ntBASIC20.06■□□□□ 0.8
KDM5CP41229 AC114781.1-201ENST00000450559 1028 ntBASIC20.06■□□□□ 0.8
KDM5CP41229 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC20.06■□□□□ 0.8
KDM5CP41229 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KDM5CP41229 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 AC079331.1-201ENST00000623200 1200 ntBASIC20.06■□□□□ 0.8
KDM5CP41229 RPS9-213ENST00000626547 476 ntTSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDM5CP41229 AC139749.1-202ENST00000617529 3139 ntBASIC20.06■□□□□ 0.8
KDM5CP41229 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC20.06■□□□□ 0.8
KDM5CP41229 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
KDM5CP41229 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC20.05■□□□□ 0.8
KDM5CP41229 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 MYL6-210ENST00000548400 573 ntTSL 3 BASIC20.05■□□□□ 0.8
KDM5CP41229 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 AC006273.1-201ENST00000606966 861 ntBASIC20.05■□□□□ 0.8
KDM5CP41229 AL158032.2-201ENST00000616818 195 ntBASIC20.05■□□□□ 0.8
KDM5CP41229 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 AC009118.3-201ENST00000622896 873 ntBASIC20.05■□□□□ 0.8
KDM5CP41229 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 PAX6-247ENST00000638965 979 ntTSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
KDM5CP41229 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
KDM5CP41229 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC20.05■□□□□ 0.8
KDM5CP41229 AL928921.2-201ENST00000641325 2442 ntBASIC20.05■□□□□ 0.8
KDM5CP41229 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDM5CP41229 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 AC124319.4-201ENST00000622931 2161 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
KDM5CP41229 MIR766-201ENST00000390223 111 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 POLR3DP1-201ENST00000398689 1176 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 SPTLC1P3-201ENST00000403408 259 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC20.04■□□□□ 0.8
KDM5CP41229 AC012513.2-201ENST00000441511 1137 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC20.04■□□□□ 0.8
KDM5CP41229 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC20.04■□□□□ 0.8
KDM5CP41229 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 AC009779.7-201ENST00000609031 469 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 AC099552.4-201ENST00000624248 949 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
KDM5CP41229 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms