Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6P35125 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP6P35125 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 SFPQP1-201ENST00000446621 1786 ntBASIC18.25■□□□□ 0.51
USP6P35125 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6P35125 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 MARCKSL1P2-201ENST00000401037 976 ntBASIC18.24■□□□□ 0.51
USP6P35125 RFNG-202ENST00000429557 994 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6P35125 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC18.24■□□□□ 0.51
USP6P35125 TULP3P1-202ENST00000453253 1291 ntBASIC18.24■□□□□ 0.51
USP6P35125 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.24■□□□□ 0.51
USP6P35125 RN7SL440P-201ENST00000577855 343 ntBASIC18.24■□□□□ 0.51
USP6P35125 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC18.24■□□□□ 0.51
USP6P35125 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC18.24■□□□□ 0.51
USP6P35125 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC18.24■□□□□ 0.51
USP6P35125 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
USP6P35125 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
USP6P35125 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
USP6P35125 AC011239.2-201ENST00000624820 1489 ntBASIC18.24■□□□□ 0.51
USP6P35125 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6P35125 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC18.23■□□□□ 0.51
USP6P35125 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 DDX11L8-201ENST00000535849 366 ntBASIC18.23■□□□□ 0.51
USP6P35125 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC18.23■□□□□ 0.51
USP6P35125 ABCC6P1-203ENST00000565566 1170 ntBASIC18.23■□□□□ 0.51
USP6P35125 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 AC136475.7-201ENST00000602949 592 ntBASIC18.23■□□□□ 0.51
USP6P35125 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 AC108024.1-201ENST00000626286 1721 ntBASIC18.23■□□□□ 0.51
USP6P35125 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 ABCD1P2-201ENST00000429313 1601 ntBASIC18.23■□□□□ 0.51
USP6P35125 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.23■□□□□ 0.51
USP6P35125 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 SNORA30.1-201ENST00000363193 129 ntBASIC18.23■□□□□ 0.51
USP6P35125 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP6P35125 TPT1P9-201ENST00000413759 514 ntBASIC18.23■□□□□ 0.51
USP6P35125 GAPDHP29-201ENST00000429913 985 ntBASIC18.23■□□□□ 0.51
USP6P35125 HNRNPA1P4-201ENST00000509706 756 ntBASIC18.23■□□□□ 0.51
USP6P35125 ISL1-203ENST00000511384 981 ntTSL 5 BASIC18.23■□□□□ 0.51
USP6P35125 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC18.23■□□□□ 0.51
USP6P35125 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC18.23■□□□□ 0.51
USP6P35125 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC18.23■□□□□ 0.51
USP6P35125 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP6P35125 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms