Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.87□□□□□ -0.19
NELFEP18615 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.87□□□□□ -0.19
NELFEP18615 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.87□□□□□ -0.19
NELFEP18615 PHBP15-201ENST00000574228 665 ntBASIC13.87□□□□□ -0.19
NELFEP18615 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.87□□□□□ -0.19
NELFEP18615 AL109837.1-201ENST00000603272 613 ntBASIC13.87□□□□□ -0.19
NELFEP18615 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
NELFEP18615 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.87□□□□□ -0.19
NELFEP18615 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NELFEP18615 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NELFEP18615 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.87□□□□□ -0.19
NELFEP18615 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.87□□□□□ -0.19
NELFEP18615 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NELFEP18615 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NELFEP18615 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NELFEP18615 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NELFEP18615 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NELFEP18615 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
NELFEP18615 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NELFEP18615 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.86□□□□□ -0.19
NELFEP18615 AP002761.4-201ENST00000565433 3361 ntBASIC13.86□□□□□ -0.19
NELFEP18615 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NELFEP18615 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.86□□□□□ -0.19
NELFEP18615 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.86□□□□□ -0.19
NELFEP18615 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 RN7SL67P-201ENST00000492147 296 ntBASIC13.86□□□□□ -0.19
NELFEP18615 AC019193.1-201ENST00000506678 823 ntBASIC13.86□□□□□ -0.19
NELFEP18615 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
NELFEP18615 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.86□□□□□ -0.19
NELFEP18615 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 AC022497.1-201ENST00000624916 3691 ntBASIC13.86□□□□□ -0.19
NELFEP18615 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.86□□□□□ -0.19
NELFEP18615 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 RN7SL832P-201ENST00000607781 1756 ntBASIC13.86□□□□□ -0.19
NELFEP18615 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NELFEP18615 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NELFEP18615 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.85□□□□□ -0.19
NELFEP18615 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 MIR193BHG-211ENST00000641433 5365 ntBASIC13.85□□□□□ -0.19
NELFEP18615 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NELFEP18615 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NELFEP18615 RNA5SP359-201ENST00000364838 113 ntBASIC13.85□□□□□ -0.19
NELFEP18615 OR2K2-202ENST00000374428 1038 ntBASIC13.85□□□□□ -0.19
NELFEP18615 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NELFEP18615 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NELFEP18615 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms