Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.43□□□□□ -0.26
COX4I1P13073 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.43□□□□□ -0.26
COX4I1P13073 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 PES1-205ENST00000405677 2708 ntTSL 2 BASIC13.43□□□□□ -0.26
COX4I1P13073 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.43□□□□□ -0.26
COX4I1P13073 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
COX4I1P13073 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COX4I1P13073 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 AC092117.1-201ENST00000621230 3250 ntBASIC13.43□□□□□ -0.26
COX4I1P13073 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.43□□□□□ -0.26
COX4I1P13073 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC13.43□□□□□ -0.26
COX4I1P13073 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 AC020763.3-201ENST00000625095 2904 ntBASIC13.43□□□□□ -0.26
COX4I1P13073 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COX4I1P13073 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
COX4I1P13073 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
COX4I1P13073 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
COX4I1P13073 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 C2orf27AP3-201ENST00000434123 579 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 KRT17P7-201ENST00000451704 1104 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 PPY2P-201ENST00000582808 702 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 AC010319.3-201ENST00000597028 470 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 AL354718.3-201ENST00000616414 581 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 CR382287.1-201ENST00000623954 586 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 AC015967.2-201ENST00000624092 234 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 AC006435.4-201ENST00000625037 234 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.42□□□□□ -0.26
COX4I1P13073 AL356737.1-201ENST00000634391 234 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 AL358472.5-202ENST00000641448 1267 ntBASIC13.42□□□□□ -0.26
COX4I1P13073 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
COX4I1P13073 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
COX4I1P13073 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COX4I1P13073 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COX4I1P13073 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.42□□□□□ -0.26
COX4I1P13073 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
COX4I1P13073 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms