Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 AL359183.1-201ENST00000623796 2132 ntBASIC14.03□□□□□ -0.16
RETP07949 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.03□□□□□ -0.16
RETP07949 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.03□□□□□ -0.16
RETP07949 KRT18P62-201ENST00000446618 1287 ntBASIC14.03□□□□□ -0.16
RETP07949 RN7SL788P-201ENST00000460504 316 ntBASIC14.03□□□□□ -0.16
RETP07949 RN7SL147P-201ENST00000487345 298 ntBASIC14.03□□□□□ -0.16
RETP07949 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RETP07949 ODCP-201ENST00000459650 1639 ntBASIC14.03□□□□□ -0.16
RETP07949 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 RN7SL832P-201ENST00000607781 1756 ntBASIC14.03□□□□□ -0.16
RETP07949 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RETP07949 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.03□□□□□ -0.16
RETP07949 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.03□□□□□ -0.16
RETP07949 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RETP07949 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RETP07949 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RETP07949 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RETP07949 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.02□□□□□ -0.16
RETP07949 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.02□□□□□ -0.16
RETP07949 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.02□□□□□ -0.16
RETP07949 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 MYADML-201ENST00000474610 2147 ntBASIC14.02□□□□□ -0.16
RETP07949 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.02□□□□□ -0.16
RETP07949 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
RETP07949 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.02□□□□□ -0.16
RETP07949 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RETP07949 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.02□□□□□ -0.16
RETP07949 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
RETP07949 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 AC106827.1-201ENST00000366454 431 ntBASIC14.02□□□□□ -0.17
RETP07949 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RETP07949 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.02□□□□□ -0.17
RETP07949 BX679664.3-201ENST00000414070 555 ntBASIC14.02□□□□□ -0.17
RETP07949 OR52M2P-201ENST00000414298 959 ntBASIC14.02□□□□□ -0.17
RETP07949 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.02□□□□□ -0.17
RETP07949 AL080243.1-201ENST00000423293 1060 ntBASIC14.02□□□□□ -0.17
RETP07949 AC027612.2-202ENST00000445955 1199 ntBASIC14.02□□□□□ -0.17
RETP07949 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RETP07949 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.02□□□□□ -0.17
RETP07949 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.02□□□□□ -0.17
RETP07949 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.02□□□□□ -0.17
RETP07949 AC113935.1-201ENST00000471722 555 ntBASIC14.02□□□□□ -0.17
RETP07949 AC004801.1-201ENST00000549557 360 ntBASIC14.02□□□□□ -0.17
RETP07949 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.02□□□□□ -0.17
RETP07949 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.02□□□□□ -0.17
RETP07949 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.02□□□□□ -0.17
RETP07949 AL009176.1-201ENST00000607876 650 ntBASIC14.02□□□□□ -0.17
RETP07949 MIR6074-201ENST00000612054 107 ntBASIC14.02□□□□□ -0.17
RETP07949 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.02□□□□□ -0.17
RETP07949 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.02□□□□□ -0.17
RETP07949 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RETP07949 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms