Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AL596257.1-201ENST00000641463 2694 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AC002350.2-201ENST00000623894 1828 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 TPI1P3-201ENST00000335020 740 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 CDKN2A-AS1-201ENST00000441769 823 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 PRDX2P3-201ENST00000515779 586 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 Z98259.1-201ENST00000564261 1697 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 AC015813.5-201ENST00000624641 1514 ntBASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC19.98■□□□□ 0.79
SHANK2Q9UPX8 SFPQP1-201ENST00000446621 1786 ntBASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 PXK-210ENST00000479241 2817 ntTSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 AC073869.1-201ENST00000415574 2762 ntBASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHANK2Q9UPX8 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 KRT18P40-201ENST00000599859 1571 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 MIR324-201ENST00000362183 83 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC005822.1-201ENST00000414124 1034 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 HNRNPA1P55-201ENST00000505935 955 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 OR52V1P-201ENST00000515557 898 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC087072.1-201ENST00000603727 421 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC117500.5-201ENST00000623233 527 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms