Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 FAM90A2P-201ENST00000511144 1395 ntBASIC14.77□□□□□ -0.04
CD248Q9HCU0 FAM90A25P-201ENST00000528404 1395 ntBASIC14.77□□□□□ -0.04
CD248Q9HCU0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 AL627231.1-201ENST00000394467 1125 ntBASIC14.77□□□□□ -0.05
CD248Q9HCU0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 AC098935.1-201ENST00000446057 611 ntBASIC14.77□□□□□ -0.05
CD248Q9HCU0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 RN7SL181P-201ENST00000462921 277 ntBASIC14.77□□□□□ -0.05
CD248Q9HCU0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 RBM8B-201ENST00000555532 525 ntBASIC14.77□□□□□ -0.05
CD248Q9HCU0 NPM1P43-201ENST00000558669 786 ntBASIC14.77□□□□□ -0.05
CD248Q9HCU0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 MIR3188-201ENST00000583494 85 ntBASIC14.77□□□□□ -0.05
CD248Q9HCU0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.77□□□□□ -0.05
CD248Q9HCU0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD248Q9HCU0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 AC090505.1-201ENST00000430515 1834 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 AC026320.2-201ENST00000434379 478 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 NOC2LP1-201ENST00000450578 752 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 NDUFS6P1-201ENST00000485187 316 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 MIR6769A-201ENST00000617340 73 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 MIR7845-201ENST00000618396 99 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 AC092299.1-201ENST00000632679 757 ntBASIC14.76□□□□□ -0.05
CD248Q9HCU0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD248Q9HCU0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms