Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 DPY19L2P5-201ENST00000456300 331 ntBASIC20.04■□□□□ 0.8
SIN3AQ96ST3 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 CD44-224ENST00000526669 870 ntTSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AC004241.5-201ENST00000623870 2448 ntBASIC20.03■□□□□ 0.8
SIN3AQ96ST3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AL354861.1-201ENST00000445213 355 ntBASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AC005077.3-201ENST00000449614 213 ntBASIC20.03■□□□□ 0.8
SIN3AQ96ST3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AC073911.3-201ENST00000624401 631 ntBASIC20.03■□□□□ 0.8
SIN3AQ96ST3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 AC009474.1-201ENST00000455096 1565 ntBASIC20.03■□□□□ 0.8
SIN3AQ96ST3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 FLJ16779-201ENST00000612722 7638 ntBASIC20.03■□□□□ 0.8
SIN3AQ96ST3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
SIN3AQ96ST3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 OR2W2P-201ENST00000406313 909 ntBASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AL359091.4-201ENST00000610052 409 ntBASIC20.02■□□□□ 0.8
SIN3AQ96ST3 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC20.02■□□□□ 0.8
SIN3AQ96ST3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ERG-211ENST00000453032 1595 ntTSL 2 BASIC20.02■□□□□ 0.8
SIN3AQ96ST3 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms