Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.08■□□□□ 0.32
AFDNP55196 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC17.08■□□□□ 0.32
AFDNP55196 PXK-210ENST00000479241 2817 ntTSL 2 BASIC17.08■□□□□ 0.32
AFDNP55196 SNX18-202ENST00000343017 3140 ntBASIC17.08■□□□□ 0.32
AFDNP55196 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AFDNP55196 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AFDNP55196 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AFDNP55196 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AFDNP55196 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AFDNP55196 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC17.08■□□□□ 0.32
AFDNP55196 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
AFDNP55196 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 MIR339-201ENST00000362153 94 ntBASIC17.07■□□□□ 0.32
AFDNP55196 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC17.07■□□□□ 0.32
AFDNP55196 CDKN2A-AS1-201ENST00000441769 823 ntBASIC17.07■□□□□ 0.32
AFDNP55196 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.07■□□□□ 0.32
AFDNP55196 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC17.07■□□□□ 0.32
AFDNP55196 AP001462.1-201ENST00000594089 452 ntBASIC17.07■□□□□ 0.32
AFDNP55196 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC17.07■□□□□ 0.32
AFDNP55196 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AFDNP55196 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.07■□□□□ 0.32
AFDNP55196 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.07■□□□□ 0.32
AFDNP55196 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.07■□□□□ 0.32
AFDNP55196 OR7E12P-201ENST00000344740 973 ntBASIC17.07■□□□□ 0.32
AFDNP55196 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC17.07■□□□□ 0.32
AFDNP55196 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC17.07■□□□□ 0.32
AFDNP55196 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC17.07■□□□□ 0.32
AFDNP55196 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC17.07■□□□□ 0.32
AFDNP55196 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC17.07■□□□□ 0.32
AFDNP55196 AC005865.2-202ENST00000635814 725 ntBASIC17.07■□□□□ 0.32
AFDNP55196 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 RHPN1-AS1-201ENST00000518049 1918 ntBASIC17.07■□□□□ 0.32
AFDNP55196 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AFDNP55196 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC17.07■□□□□ 0.32
AFDNP55196 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AFDNP55196 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 CR383656.2-201ENST00000548656 2254 ntBASIC17.06■□□□□ 0.32
AFDNP55196 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC17.06■□□□□ 0.32
AFDNP55196 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.06■□□□□ 0.32
AFDNP55196 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.06■□□□□ 0.32
AFDNP55196 SNRPCP15-201ENST00000424055 192 ntBASIC17.06■□□□□ 0.32
AFDNP55196 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC17.06■□□□□ 0.32
AFDNP55196 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC17.06■□□□□ 0.32
AFDNP55196 AC026412.1-206ENST00000502273 206 ntBASIC17.06■□□□□ 0.32
AFDNP55196 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.06■□□□□ 0.32
AFDNP55196 IFNL3P1-201ENST00000595082 501 ntBASIC17.06■□□□□ 0.32
AFDNP55196 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AFDNP55196 CR392039.2-201ENST00000623182 509 ntBASIC17.06■□□□□ 0.32
AFDNP55196 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
AFDNP55196 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 ZNF493-208ENST00000599461 1769 ntBASIC17.06■□□□□ 0.32
AFDNP55196 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC17.06■□□□□ 0.32
AFDNP55196 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AFDNP55196 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
AFDNP55196 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC17.05■□□□□ 0.32
AFDNP55196 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.05■□□□□ 0.32
AFDNP55196 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.05■□□□□ 0.32
AFDNP55196 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC17.05■□□□□ 0.32
AFDNP55196 RN7SL173P-201ENST00000461853 292 ntBASIC17.05■□□□□ 0.32
AFDNP55196 PIGCP1-201ENST00000527583 895 ntBASIC17.05■□□□□ 0.32
AFDNP55196 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
AFDNP55196 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC17.05■□□□□ 0.32
AFDNP55196 PHBP18-201ENST00000546648 813 ntBASIC17.05■□□□□ 0.32
AFDNP55196 AC087072.1-201ENST00000603727 421 ntBASIC17.05■□□□□ 0.32
AFDNP55196 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.05■□□□□ 0.32
AFDNP55196 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
AFDNP55196 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
AFDNP55196 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.05■□□□□ 0.32
AFDNP55196 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AFDNP55196 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.05■□□□□ 0.32
AFDNP55196 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms