Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC14.93□□□□□ -0.02
HTTP42858 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTTP42858 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.93□□□□□ -0.02
HTTP42858 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.93□□□□□ -0.02
HTTP42858 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HTTP42858 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTTP42858 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTTP42858 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTTP42858 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC14.93□□□□□ -0.02
HTTP42858 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HTTP42858 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTTP42858 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTTP42858 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.93□□□□□ -0.02
HTTP42858 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC14.93□□□□□ -0.02
HTTP42858 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.93□□□□□ -0.02
HTTP42858 AC015959.1-201ENST00000623263 1377 ntBASIC14.93□□□□□ -0.02
HTTP42858 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC14.92□□□□□ -0.02
HTTP42858 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC14.92□□□□□ -0.02
HTTP42858 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 RPSAP5-201ENST00000485258 884 ntBASIC14.92□□□□□ -0.02
HTTP42858 PIGCP1-201ENST00000527583 895 ntBASIC14.92□□□□□ -0.02
HTTP42858 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 AC117500.5-201ENST00000623233 527 ntBASIC14.92□□□□□ -0.02
HTTP42858 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 AC023830.3-201ENST00000612995 1455 ntBASIC14.92□□□□□ -0.02
HTTP42858 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HTTP42858 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 MED20-204ENST00000409312 932 ntTSL 2 BASIC14.92□□□□□ -0.02
HTTP42858 EEF1GP3-201ENST00000421044 1288 ntBASIC14.92□□□□□ -0.02
HTTP42858 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
HTTP42858 HNRNPA1P55-201ENST00000505935 955 ntBASIC14.92□□□□□ -0.02
HTTP42858 SNORA74.2-201ENST00000516496 180 ntBASIC14.92□□□□□ -0.02
HTTP42858 AC106782.3-201ENST00000563429 258 ntBASIC14.92□□□□□ -0.02
HTTP42858 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 HIST1H2APS4-202ENST00000635537 681 ntBASIC14.92□□□□□ -0.02
HTTP42858 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HTTP42858 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 TUBB8P4-201ENST00000511806 1324 ntBASIC14.92□□□□□ -0.02
HTTP42858 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 AC018445.4-201ENST00000624066 2291 ntBASIC14.92□□□□□ -0.02
HTTP42858 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC14.92□□□□□ -0.02
HTTP42858 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HTTP42858 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC14.92□□□□□ -0.02
HTTP42858 COQ4-202ENST00000372875 928 ntTSL 2 BASIC14.92□□□□□ -0.02
HTTP42858 AL049542.1-201ENST00000430231 278 ntBASIC14.92□□□□□ -0.02
HTTP42858 AC098591.1-202ENST00000507914 937 ntBASIC14.92□□□□□ -0.02
HTTP42858 EEF1DP8-201ENST00000534760 536 ntBASIC14.92□□□□□ -0.02
HTTP42858 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC14.92□□□□□ -0.02
HTTP42858 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HTTP42858 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTTP42858 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.92□□□□□ -0.02
HTTP42858 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 AC064836.1-201ENST00000405197 704 ntBASIC14.91□□□□□ -0.02
HTTP42858 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC14.91□□□□□ -0.02
HTTP42858 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC14.91□□□□□ -0.02
HTTP42858 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HTTP42858 AC131274.3-201ENST00000578745 1271 ntBASIC14.91□□□□□ -0.02
HTTP42858 AL353997.3-201ENST00000586597 589 ntBASIC14.91□□□□□ -0.02
HTTP42858 RN7SL238P-201ENST00000613832 290 ntBASIC14.91□□□□□ -0.02
HTTP42858 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC14.91□□□□□ -0.02
HTTP42858 RN7SL106P-201ENST00000618104 290 ntBASIC14.91□□□□□ -0.02
HTTP42858 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC14.91□□□□□ -0.02
HTTP42858 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HTTP42858 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.91□□□□□ -0.02
HTTP42858 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.91□□□□□ -0.02
HTTP42858 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC14.91□□□□□ -0.02
HTTP42858 AC114781.1-201ENST00000450559 1028 ntBASIC14.91□□□□□ -0.02
HTTP42858 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC14.91□□□□□ -0.02
HTTP42858 AC233724.7-201ENST00000511476 253 ntBASIC14.91□□□□□ -0.02
HTTP42858 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC14.91□□□□□ -0.02
HTTP42858 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HTTP42858 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC14.91□□□□□ -0.02
HTTP42858 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.91□□□□□ -0.02
HTTP42858 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 TNRC18P2-201ENST00000417666 2714 ntBASIC14.91□□□□□ -0.02
HTTP42858 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HTTP42858 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms