Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 NBPF17P-201ENST00000401087 2119 ntBASIC15.91■□□□□ 0.14
CLCN1P35523 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 AL136172.1-201ENST00000598590 1394 ntBASIC15.91■□□□□ 0.14
CLCN1P35523 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCN1P35523 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCN1P35523 AL355864.2-201ENST00000447420 863 ntBASIC15.91■□□□□ 0.14
CLCN1P35523 BCRP2-202ENST00000447763 634 ntBASIC15.91■□□□□ 0.14
CLCN1P35523 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCN1P35523 BCRP6-201ENST00000510112 632 ntBASIC15.91■□□□□ 0.14
CLCN1P35523 BCRP7-201ENST00000511549 544 ntBASIC15.91■□□□□ 0.14
CLCN1P35523 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN1P35523 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCN1P35523 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN1P35523 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN1P35523 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCN1P35523 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLCN1P35523 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN1P35523 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN1P35523 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
CLCN1P35523 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CLCN1P35523 AL512384.1-201ENST00000406683 331 ntBASIC15.9■□□□□ 0.14
CLCN1P35523 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 FTLP10-202ENST00000505798 471 ntBASIC15.9■□□□□ 0.14
CLCN1P35523 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 SORD2P-201ENST00000558556 1069 ntBASIC15.9■□□□□ 0.14
CLCN1P35523 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN1P35523 AC015936.2-201ENST00000593177 259 ntBASIC15.9■□□□□ 0.14
CLCN1P35523 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN1P35523 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLCN1P35523 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN1P35523 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms