Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.1□□□□□ -0.15
XPAP23025 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.1□□□□□ -0.15
XPAP23025 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.1□□□□□ -0.15
XPAP23025 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.1□□□□□ -0.15
XPAP23025 RN7SL767P-201ENST00000493013 295 ntBASIC14.1□□□□□ -0.15
XPAP23025 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.1□□□□□ -0.15
XPAP23025 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.1□□□□□ -0.15
XPAP23025 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 AC135983.4-201ENST00000564116 1262 ntBASIC14.1□□□□□ -0.15
XPAP23025 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.1□□□□□ -0.15
XPAP23025 MIR2392-201ENST00000584881 84 ntBASIC14.1□□□□□ -0.15
XPAP23025 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.1□□□□□ -0.15
XPAP23025 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.1□□□□□ -0.15
XPAP23025 AL359091.4-201ENST00000610052 409 ntBASIC14.1□□□□□ -0.15
XPAP23025 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
XPAP23025 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.1□□□□□ -0.15
XPAP23025 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.1□□□□□ -0.15
XPAP23025 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
XPAP23025 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.1□□□□□ -0.15
XPAP23025 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
XPAP23025 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.1□□□□□ -0.15
XPAP23025 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
XPAP23025 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.1□□□□□ -0.15
XPAP23025 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XPAP23025 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.09□□□□□ -0.15
XPAP23025 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.09□□□□□ -0.15
XPAP23025 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 AK2P2-201ENST00000439142 405 ntBASIC14.09□□□□□ -0.15
XPAP23025 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
XPAP23025 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.09□□□□□ -0.15
XPAP23025 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.09□□□□□ -0.15
XPAP23025 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 MIR3147-201ENST00000577811 66 ntBASIC14.09□□□□□ -0.15
XPAP23025 MIR4265-201ENST00000582152 99 ntBASIC14.09□□□□□ -0.15
XPAP23025 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.09□□□□□ -0.15
XPAP23025 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.09□□□□□ -0.15
XPAP23025 AC073352.2-201ENST00000609385 439 ntBASIC14.09□□□□□ -0.15
XPAP23025 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 AL731571.1-201ENST00000617058 5428 ntBASIC14.09□□□□□ -0.15
XPAP23025 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.09□□□□□ -0.15
XPAP23025 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XPAP23025 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.09□□□□□ -0.15
XPAP23025 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
XPAP23025 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
XPAP23025 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
XPAP23025 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
XPAP23025 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC14.08□□□□□ -0.15
XPAP23025 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
XPAP23025 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XPAP23025 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
XPAP23025 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.08□□□□□ -0.16
XPAP23025 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XPAP23025 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XPAP23025 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.08□□□□□ -0.16
XPAP23025 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XPAP23025 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
XPAP23025 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XPAP23025 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms