Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 AL513497.1-201ENST00000624273 2083 ntBASIC18.67■□□□□ 0.58
ATF3P18847 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ATF3P18847 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 RN7SKP255-201ENST00000363442 313 ntBASIC18.67■□□□□ 0.58
ATF3P18847 RN7SKP203-201ENST00000363618 332 ntBASIC18.67■□□□□ 0.58
ATF3P18847 RN7SKP71-201ENST00000364558 318 ntBASIC18.67■□□□□ 0.58
ATF3P18847 7SK.1-201ENST00000365328 331 ntBASIC18.67■□□□□ 0.58
ATF3P18847 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 FTH1-205ENST00000529631 507 ntTSL 4 BASIC18.67■□□□□ 0.58
ATF3P18847 AC063924.1-201ENST00000546680 673 ntBASIC18.67■□□□□ 0.58
ATF3P18847 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC18.67■□□□□ 0.58
ATF3P18847 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC18.67■□□□□ 0.58
ATF3P18847 AC239600.1-201ENST00000603201 462 ntBASIC18.67■□□□□ 0.58
ATF3P18847 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.67■□□□□ 0.58
ATF3P18847 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATF3P18847 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF3P18847 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATF3P18847 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.66■□□□□ 0.58
ATF3P18847 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF3P18847 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC18.66■□□□□ 0.58
ATF3P18847 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 FAM86FP-201ENST00000338711 969 ntBASIC18.66■□□□□ 0.58
ATF3P18847 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ATF3P18847 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC18.66■□□□□ 0.58
ATF3P18847 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF3P18847 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC18.66■□□□□ 0.58
ATF3P18847 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC18.66■□□□□ 0.58
ATF3P18847 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF3P18847 AC099795.2-201ENST00000639582 440 ntBASIC18.66■□□□□ 0.58
ATF3P18847 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF3P18847 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ATF3P18847 FMO6P-201ENST00000236166 1620 ntBASIC18.66■□□□□ 0.58
ATF3P18847 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC18.66■□□□□ 0.58
ATF3P18847 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATF3P18847 AP000437.1-201ENST00000624057 2085 ntBASIC18.65■□□□□ 0.58
ATF3P18847 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
ATF3P18847 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 KRT8P24-201ENST00000560290 1559 ntBASIC18.65■□□□□ 0.58
ATF3P18847 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ATF3P18847 PGAM1P10-201ENST00000402426 761 ntBASIC18.65■□□□□ 0.58
ATF3P18847 AL391903.1-201ENST00000407513 365 ntBASIC18.65■□□□□ 0.58
ATF3P18847 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 AP000343.1-201ENST00000440602 385 ntBASIC18.65■□□□□ 0.58
ATF3P18847 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC18.65■□□□□ 0.58
ATF3P18847 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC18.65■□□□□ 0.58
ATF3P18847 AC079601.2-201ENST00000547729 775 ntBASIC18.65■□□□□ 0.58
ATF3P18847 GOLGA2P10-201ENST00000550961 817 ntBASIC18.65■□□□□ 0.58
ATF3P18847 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC18.65■□□□□ 0.58
ATF3P18847 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ATF3P18847 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
ATF3P18847 AL589743.3-201ENST00000604121 517 ntBASIC18.65■□□□□ 0.58
ATF3P18847 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms