Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC23.36■■□□□ 1.33
TOP2AP11388 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TOP2AP11388 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TOP2AP11388 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TOP2AP11388 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TOP2AP11388 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TOP2AP11388 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TOP2AP11388 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC23.36■■□□□ 1.33
TOP2AP11388 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC23.36■■□□□ 1.33
TOP2AP11388 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TOP2AP11388 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
TOP2AP11388 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC23.35■■□□□ 1.33
TOP2AP11388 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC23.35■■□□□ 1.33
TOP2AP11388 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC23.35■■□□□ 1.33
TOP2AP11388 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC23.35■■□□□ 1.33
TOP2AP11388 AC127002.1-201ENST00000619123 455 ntBASIC23.35■■□□□ 1.33
TOP2AP11388 AC138430.2-201ENST00000624068 504 ntBASIC23.35■■□□□ 1.33
TOP2AP11388 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC23.35■■□□□ 1.33
TOP2AP11388 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC23.35■■□□□ 1.33
TOP2AP11388 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TOP2AP11388 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 AC106872.9-201ENST00000512437 1393 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 MKL1-204ENST00000402630 747 ntTSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC23.34■■□□□ 1.33
TOP2AP11388 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 ALOX12P1-201ENST00000579299 1229 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 RN7SL678P-201ENST00000579533 299 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 AL109983.1-201ENST00000603234 646 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 AL359845.1-201ENST00000458202 1648 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TOP2AP11388 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 FTO-214ENST00000636218 2227 ntTSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 AC244154.1-201ENST00000620148 1555 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 CLUHP8-201ENST00000547527 1485 ntBASIC23.34■■□□□ 1.33
TOP2AP11388 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC23.34■■□□□ 1.33
TOP2AP11388 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TOP2AP11388 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
TOP2AP11388 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TOP2AP11388 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC23.33■■□□□ 1.33
TOP2AP11388 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC23.33■■□□□ 1.33
TOP2AP11388 AC012100.1-201ENST00000470304 282 ntBASIC23.33■■□□□ 1.33
TOP2AP11388 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TOP2AP11388 NAT9-204ENST00000578822 839 ntTSL 3 BASIC23.33■■□□□ 1.33
TOP2AP11388 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC23.33■■□□□ 1.33
TOP2AP11388 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 AC073488.1-201ENST00000416620 1600 ntBASIC23.33■■□□□ 1.33
TOP2AP11388 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
TOP2AP11388 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
TOP2AP11388 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TOP2AP11388 AC023794.5-201ENST00000564380 2157 ntBASIC23.33■■□□□ 1.33
TOP2AP11388 AC012531.1-201ENST00000562848 2680 ntBASIC23.33■■□□□ 1.32
TOP2AP11388 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.33■■□□□ 1.32
TOP2AP11388 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TOP2AP11388 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TOP2AP11388 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC23.33■■□□□ 1.32
TOP2AP11388 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC23.33■■□□□ 1.32
TOP2AP11388 AC026304.1-201ENST00000597953 561 ntBASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms