Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC8.48□□□□□ -1.05
PKHD1P08F94 AC106748.1-201ENST00000454801 384 ntBASIC8.48□□□□□ -1.05
PKHD1P08F94 AC022447.6-201ENST00000515522 438 ntBASIC8.48□□□□□ -1.05
PKHD1P08F94 DDC-213ENST00000617822 1809 ntTSL 3 BASIC8.48□□□□□ -1.05
PKHD1P08F94 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 ABR-228ENST00000574437 3196 ntTSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
PKHD1P08F94 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 STK3-218ENST00000617590 2485 ntTSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 BCRP5-201ENST00000514371 253 ntBASIC8.48□□□□□ -1.05
PKHD1P08F94 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC8.48□□□□□ -1.05
PKHD1P08F94 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC8.48□□□□□ -1.05
PKHD1P08F94 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC8.48□□□□□ -1.05
PKHD1P08F94 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC8.48□□□□□ -1.05
PKHD1P08F94 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC8.48□□□□□ -1.05
PKHD1P08F94 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PKHD1P08F94 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 ZDHHC8P1-202ENST00000418264 1403 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 GOLGA8EP-201ENST00000530246 1959 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 AL356583.3-201ENST00000412354 417 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 RN7SL225P-201ENST00000464648 298 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC8.47□□□□□ -1.05
PKHD1P08F94 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC8.47□□□□□ -1.05
PKHD1P08F94 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC8.47□□□□□ -1.05
PKHD1P08F94 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PKHD1P08F94 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 AC025538.1-201ENST00000510707 1486 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC8.47□□□□□ -1.05
PKHD1P08F94 AC096919.1-201ENST00000472730 652 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC8.47□□□□□ -1.05
PKHD1P08F94 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC8.47□□□□□ -1.05
PKHD1P08F94 Z69706.1-201ENST00000595428 547 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 AC106774.4-201ENST00000600799 409 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 ERG-211ENST00000453032 1595 ntTSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PKHD1P08F94 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 AL356653.1-201ENST00000402743 360 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 C2orf27AP2-201ENST00000438438 555 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC8.47□□□□□ -1.05
PKHD1P08F94 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC8.47□□□□□ -1.05
PKHD1P08F94 PEBP1P1-201ENST00000554856 510 ntBASIC8.47□□□□□ -1.05
PKHD1P08F94 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC8.47□□□□□ -1.05
PKHD1P08F94 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC8.47□□□□□ -1.05
PKHD1P08F94 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC8.47□□□□□ -1.05
PKHD1P08F94 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PKHD1P08F94 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
PKHD1P08F94 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PKHD1P08F94 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PKHD1P08F94 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms