Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOA4P06727 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
APOA4P06727 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
APOA4P06727 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOA4P06727 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.02□□□□□ -0.16
APOA4P06727 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA4P06727 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 AC020907.1-201ENST00000616460 1350 ntBASIC14.02□□□□□ -0.17
APOA4P06727 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
APOA4P06727 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
APOA4P06727 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA4P06727 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.02□□□□□ -0.17
APOA4P06727 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA4P06727 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
APOA4P06727 GPAA1P2-201ENST00000417923 928 ntBASIC14.02□□□□□ -0.17
APOA4P06727 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA4P06727 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA4P06727 GOLGA2P8-201ENST00000505201 779 ntBASIC14.02□□□□□ -0.17
APOA4P06727 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.02□□□□□ -0.17
APOA4P06727 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 MIR3615-201ENST00000581999 87 ntBASIC14.02□□□□□ -0.17
APOA4P06727 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.02□□□□□ -0.17
APOA4P06727 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
APOA4P06727 AC091544.8-201ENST00000619490 361 ntBASIC14.02□□□□□ -0.17
APOA4P06727 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA4P06727 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA4P06727 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA4P06727 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
APOA4P06727 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA4P06727 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA4P06727 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.01□□□□□ -0.17
APOA4P06727 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.01□□□□□ -0.17
APOA4P06727 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 TUBBP5-203ENST00000508529 1334 ntBASIC14.01□□□□□ -0.17
APOA4P06727 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 RNA5SP359-201ENST00000364838 113 ntBASIC14.01□□□□□ -0.17
APOA4P06727 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
APOA4P06727 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.01□□□□□ -0.17
APOA4P06727 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
APOA4P06727 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.01□□□□□ -0.17
APOA4P06727 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 AC093752.3-201ENST00000567343 901 ntBASIC14.01□□□□□ -0.17
APOA4P06727 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.01□□□□□ -0.17
APOA4P06727 AL022334.2-201ENST00000610000 484 ntBASIC14.01□□□□□ -0.17
APOA4P06727 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.01□□□□□ -0.17
APOA4P06727 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
APOA4P06727 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms