Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RB1P06400 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.55□□□□□ -0.08
RB1P06400 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC14.55□□□□□ -0.08
RB1P06400 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.55□□□□□ -0.08
RB1P06400 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 SNORA47-201ENST00000458862 138 ntBASIC14.55□□□□□ -0.08
RB1P06400 SNRPD2P2-201ENST00000473818 333 ntBASIC14.55□□□□□ -0.08
RB1P06400 RN7SL838P-201ENST00000481676 295 ntBASIC14.55□□□□□ -0.08
RB1P06400 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 RN7SL440P-201ENST00000577855 343 ntBASIC14.55□□□□□ -0.08
RB1P06400 RN7SL162P-201ENST00000579233 292 ntBASIC14.55□□□□□ -0.08
RB1P06400 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC14.55□□□□□ -0.08
RB1P06400 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.55□□□□□ -0.08
RB1P06400 AP001462.1-201ENST00000594089 452 ntBASIC14.55□□□□□ -0.08
RB1P06400 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.55□□□□□ -0.08
RB1P06400 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.55□□□□□ -0.08
RB1P06400 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RB1P06400 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC14.55□□□□□ -0.08
RB1P06400 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 AL050341.2-201ENST00000567508 1541 ntBASIC14.55□□□□□ -0.08
RB1P06400 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.54□□□□□ -0.08
RB1P06400 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RB1P06400 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC14.54□□□□□ -0.08
RB1P06400 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC14.54□□□□□ -0.08
RB1P06400 SNRPCP15-201ENST00000424055 192 ntBASIC14.54□□□□□ -0.08
RB1P06400 TPT1P6-201ENST00000458298 514 ntBASIC14.54□□□□□ -0.08
RB1P06400 RN7SL672P-201ENST00000474091 317 ntBASIC14.54□□□□□ -0.08
RB1P06400 MTHFD2P7-201ENST00000483867 983 ntBASIC14.54□□□□□ -0.08
RB1P06400 AF186996.6-201ENST00000485294 149 ntBASIC14.54□□□□□ -0.08
RB1P06400 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14.54□□□□□ -0.08
RB1P06400 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.54□□□□□ -0.08
RB1P06400 ABCC6P1-203ENST00000565566 1170 ntBASIC14.54□□□□□ -0.08
RB1P06400 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.54□□□□□ -0.08
RB1P06400 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 AC009041.4-201ENST00000620075 638 ntBASIC14.54□□□□□ -0.08
RB1P06400 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.54□□□□□ -0.08
RB1P06400 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RB1P06400 AC093462.1-201ENST00000621167 1683 ntBASIC14.54□□□□□ -0.08
RB1P06400 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms