Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 TBC1D3J-201ENST00000620719 1426 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AL583805.1-201ENST00000391389 531 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 RN7SL181P-201ENST00000462921 277 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AC114947.1-202ENST00000514136 344 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 NDUFB10P1-201ENST00000567319 521 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AC006453.1-201ENST00000636037 1257 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AC243964.3-201ENST00000623022 2028 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 FAM90A2P-201ENST00000511144 1395 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 FAM90A25P-201ENST00000528404 1395 ntBASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CUEDC1Q9NWM3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 MARK2P16-201ENST00000605714 1723 ntBASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 KRT8P43-201ENST00000406052 1458 ntBASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 RPSAP31-201ENST00000416648 895 ntBASIC13.56□□□□□ -0.24
CUEDC1Q9NWM3 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms