Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.32□□□□□ -0.44
AP3S1Q92572 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S1Q92572 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 CCT8L1P-201ENST00000465400 1674 ntBASIC12.32□□□□□ -0.44
AP3S1Q92572 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S1Q92572 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S1Q92572 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S1Q92572 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC011700.1-201ENST00000610409 2627 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S1Q92572 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 ACKR1-201ENST00000368121 1240 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 MEP1AP4-201ENST00000423244 1087 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AL442647.2-201ENST00000429864 857 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S1Q92572 YBX1P5-201ENST00000509441 847 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 AC104596.2-201ENST00000512793 793 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC124283.3-201ENST00000570869 594 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AC027601.3-201ENST00000622907 509 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
AP3S1Q92572 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 SHMT1P1-201ENST00000419974 1312 ntBASIC12.31□□□□□ -0.44
AP3S1Q92572 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.31□□□□□ -0.44
AP3S1Q92572 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S1Q92572 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S1Q92572 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S1Q92572 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AP3S1Q92572 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 AC009093.2-202ENST00000620513 2079 ntBASIC12.3□□□□□ -0.44
AP3S1Q92572 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S1Q92572 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S1Q92572 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S1Q92572 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms