Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC073862.5-201ENST00000624129 2027 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC060814.4-201ENST00000594169 2163 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AL354877.1-201ENST00000424412 413 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AL157407.1-201ENST00000435784 904 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 FAM58BP-201ENST00000439056 645 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC100827.2-201ENST00000563214 1194 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 MIR4259-201ENST00000584466 101 ntBASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTN4IP1Q8WWV3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC244394.1-201ENST00000435000 1665 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC011481.3-201ENST00000623895 5594 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC108024.1-201ENST00000626286 1721 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AL645933.1-201ENST00000440087 609 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 MTX1P1-201ENST00000440904 838 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 Z93015.1-201ENST00000451718 390 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 KRT18P15-201ENST00000458108 1291 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 RBM8B-201ENST00000555532 525 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC009884.2-201ENST00000603110 324 ntBASIC11.81□□□□□ -0.52
RTN4IP1Q8WWV3 AC009542.2-202ENST00000619004 1067 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms