Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC104758.3-203ENST00000562938 2123 ntBASIC12.5□□□□□ -0.41
LRRC28Q86X40 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 RN7SKP230-201ENST00000365642 335 ntBASIC12.5□□□□□ -0.41
LRRC28Q86X40 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 MTX1P1-201ENST00000440904 838 ntBASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 RPSAP36-202ENST00000494591 1261 ntBASIC12.5□□□□□ -0.41
LRRC28Q86X40 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 MIR4538-201ENST00000581377 78 ntBASIC12.5□□□□□ -0.41
LRRC28Q86X40 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 AC108024.1-201ENST00000626286 1721 ntBASIC12.5□□□□□ -0.41
LRRC28Q86X40 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.5□□□□□ -0.41
LRRC28Q86X40 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LRRC28Q86X40 PTPRVP-205ENST00000641549 5067 ntBASIC12.49□□□□□ -0.41
LRRC28Q86X40 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AC015819.3-201ENST00000624305 2674 ntBASIC12.49□□□□□ -0.41
LRRC28Q86X40 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AL591846.1-201ENST00000451736 433 ntBASIC12.49□□□□□ -0.41
LRRC28Q86X40 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 FAM8A2P-201ENST00000528813 1142 ntBASIC12.49□□□□□ -0.41
LRRC28Q86X40 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 AC002472.3-201ENST00000640124 621 ntBASIC12.49□□□□□ -0.41
LRRC28Q86X40 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.49□□□□□ -0.41
LRRC28Q86X40 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LRRC28Q86X40 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms