Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 GGT8P-201ENST00000418938 532 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AC041040.1-201ENST00000425197 460 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FPGT-205ENST00000482102 561 ntTSL 4 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AC020893.2-201ENST00000506083 723 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AC011773.4-202ENST00000566000 1264 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AC124319.4-201ENST00000622931 2161 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FAM90A27P-201ENST00000593323 1370 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FAM90A28P-202ENST00000597191 1374 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AL139158.3-201ENST00000641212 1562 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AL606760.3-201ENST00000569869 3591 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CDC20P1-201ENST00000488829 1500 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 RPL18P1-201ENST00000497218 552 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AKR1B1P3-201ENST00000525311 588 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC106782.3-201ENST00000563429 258 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AP006621.5-202ENST00000623692 636 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC068760.1-201ENST00000493579 1953 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 SNORA30.1-201ENST00000363193 129 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC096919.1-201ENST00000472730 652 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 MYADML-201ENST00000474610 2147 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC096713.1-201ENST00000514650 978 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 AL356740.1-201ENST00000602192 1297 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 U62317.4-201ENST00000609758 448 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 MIR6749-201ENST00000617008 69 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 CLUHP3-207ENST00000563678 1303 ntBASIC13.23□□□□□ -0.29
RIF1Q5UIP0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms