Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CERKLQ49MI3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CERKLQ49MI3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CERKLQ49MI3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.18■□□□□ 0.18
CERKLQ49MI3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CERKLQ49MI3 AC005089.1-201ENST00000619486 2241 ntBASIC16.18■□□□□ 0.18
CERKLQ49MI3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CERKLQ49MI3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CERKLQ49MI3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 CICP4-201ENST00000447359 2812 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 FAM45BP-202ENST00000592932 1624 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 COX20P1-201ENST00000366529 357 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 AC104212.2-201ENST00000478813 628 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 TBC1D3P6-201ENST00000505954 962 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 AC092862.1-201ENST00000541534 533 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 AC026120.2-201ENST00000617239 309 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 AC005274.1-201ENST00000623460 802 ntBASIC16.17■□□□□ 0.18
CERKLQ49MI3 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CERKLQ49MI3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CERKLQ49MI3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC104581.4-201ENST00000623126 3052 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC244197.1-201ENST00000456494 951 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC106047.2-201ENST00000511723 743 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC068831.5-201ENST00000557387 328 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC006548.2-201ENST00000605217 529 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC026336.4-201ENST00000624565 1050 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 AC023908.3-201ENST00000564211 3047 ntBASIC16.16■□□□□ 0.18
CERKLQ49MI3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms