Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S2P59780 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 AL442647.2-201ENST00000429864 857 ntBASIC12.01□□□□□ -0.49
AP3S2P59780 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S2P59780 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S2P59780 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 AC125807.1-201ENST00000483097 614 ntBASIC12.01□□□□□ -0.49
AP3S2P59780 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.01□□□□□ -0.49
AP3S2P59780 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S2P59780 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S2P59780 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 MANEA-AS1-201ENST00000564541 2268 ntBASIC12□□□□□ -0.49
AP3S2P59780 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 POM121L4P-202ENST00000427789 1891 ntBASIC12□□□□□ -0.49
AP3S2P59780 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S2P59780 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12□□□□□ -0.49
AP3S2P59780 POM121L8P-201ENST00000417732 1281 ntBASIC12□□□□□ -0.49
AP3S2P59780 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12□□□□□ -0.49
AP3S2P59780 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12□□□□□ -0.49
AP3S2P59780 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 POM121L9P-203ENST00000441984 1285 ntBASIC12□□□□□ -0.49
AP3S2P59780 DNAJB3-201ENST00000446806 729 ntBASIC12□□□□□ -0.49
AP3S2P59780 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12□□□□□ -0.49
AP3S2P59780 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12□□□□□ -0.49
AP3S2P59780 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12□□□□□ -0.49
AP3S2P59780 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12□□□□□ -0.49
AP3S2P59780 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms