Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
FREM3P0C091 AL391647.1-201ENST00000395664 511 ntBASIC12.65□□□□□ -0.38
FREM3P0C091 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.65□□□□□ -0.38
FREM3P0C091 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.65□□□□□ -0.38
FREM3P0C091 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.65□□□□□ -0.38
FREM3P0C091 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 AL139424.3-202ENST00000641619 917 ntBASIC12.65□□□□□ -0.38
FREM3P0C091 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
FREM3P0C091 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
FREM3P0C091 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.64□□□□□ -0.39
FREM3P0C091 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.64□□□□□ -0.39
FREM3P0C091 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
FREM3P0C091 MIR1307-201ENST00000408840 149 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 AC098934.1-203ENST00000442868 1262 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 RPL7P35-201ENST00000446943 740 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.64□□□□□ -0.39
FREM3P0C091 SIGLEC22P-201ENST00000599104 714 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.64□□□□□ -0.39
FREM3P0C091 AC007250.1-201ENST00000608934 338 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 AP001184.1-201ENST00000637936 376 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
FREM3P0C091 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 AC026410.1-201ENST00000507366 1101 ntBASIC12.64□□□□□ -0.39
FREM3P0C091 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.64□□□□□ -0.39
FREM3P0C091 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
FREM3P0C091 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
FREM3P0C091 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.64□□□□□ -0.39
FREM3P0C091 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FREM3P0C091 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FREM3P0C091 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
FREM3P0C091 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.63□□□□□ -0.39
FREM3P0C091 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms