Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC009093.9-201ENST00000566038 1611 ntBASIC8.27□□□□□ -1.09
APOBP04114 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
APOBP04114 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
APOBP04114 EEF1GP1-201ENST00000457231 1299 ntBASIC8.26□□□□□ -1.09
APOBP04114 RN7SL328P-201ENST00000484033 300 ntBASIC8.26□□□□□ -1.09
APOBP04114 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC8.26□□□□□ -1.09
APOBP04114 AC110753.1-201ENST00000505711 1022 ntBASIC8.26□□□□□ -1.09
APOBP04114 HNRNPA1P55-201ENST00000505935 955 ntBASIC8.26□□□□□ -1.09
APOBP04114 IGHV3-6-201ENST00000518407 347 ntBASIC8.26□□□□□ -1.09
APOBP04114 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC8.26□□□□□ -1.09
APOBP04114 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC8.26□□□□□ -1.09
APOBP04114 AC021683.4-201ENST00000623348 1099 ntBASIC8.26□□□□□ -1.09
APOBP04114 SRL-202ENST00000537996 1814 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 AC005014.1-201ENST00000432006 2976 ntBASIC8.26□□□□□ -1.09
APOBP04114 AC073465.1-201ENST00000456671 464 ntBASIC8.26□□□□□ -1.09
APOBP04114 OR2A15P-201ENST00000463814 900 ntBASIC8.26□□□□□ -1.09
APOBP04114 RPL7AP53-201ENST00000468834 793 ntBASIC8.26□□□□□ -1.09
APOBP04114 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
APOBP04114 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 WSB1-213ENST00000583193 552 ntTSL 4 BASIC8.26□□□□□ -1.09
APOBP04114 MFSD12-215ENST00000615613 688 ntBASIC8.26□□□□□ -1.09
APOBP04114 AC012313.9-201ENST00000619318 633 ntBASIC8.26□□□□□ -1.09
APOBP04114 UBR1-212ENST00000627960 189 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 FTO-214ENST00000636218 2227 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
APOBP04114 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC8.26□□□□□ -1.09
APOBP04114 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC8.26□□□□□ -1.09
APOBP04114 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 UBA3-212ENST00000630585 390 ntTSL 4 BASIC8.26□□□□□ -1.09
APOBP04114 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
APOBP04114 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
APOBP04114 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC8.26□□□□□ -1.09
APOBP04114 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC8.25□□□□□ -1.09
APOBP04114 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 LINC00638-201ENST00000555578 2518 ntBASIC8.25□□□□□ -1.09
APOBP04114 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms