Protein–RNA interactions for Protein: Q9Y6X0

SETBP1, SET-binding protein, humanhuman

Predictions only

Length 1,596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETBP1Q9Y6X0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
SETBP1Q9Y6X0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SETBP1Q9Y6X0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 KRT18P14-201ENST00000534205 1250 ntBASIC32.14■■■□□ 2.74
SETBP1Q9Y6X0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC32.13■■■□□ 2.73
SETBP1Q9Y6X0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.13■■■□□ 2.73
SETBP1Q9Y6X0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
SETBP1Q9Y6X0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32.13■■■□□ 2.73
SETBP1Q9Y6X0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SETBP1Q9Y6X0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 AL499627.2-201ENST00000606283 725 ntBASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 AC142381.3-201ENST00000568208 1670 ntBASIC32.12■■■□□ 2.73
SETBP1Q9Y6X0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 AC010525.1-201ENST00000585559 441 ntBASIC32.11■■■□□ 2.73
SETBP1Q9Y6X0 AC133637.1-201ENST00000624115 1537 ntBASIC32.1■■■□□ 2.73
SETBP1Q9Y6X0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC32.1■■■□□ 2.73
SETBP1Q9Y6X0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
SETBP1Q9Y6X0 AC004911.1-201ENST00000416316 871 ntBASIC32.1■■■□□ 2.73
SETBP1Q9Y6X0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC32.1■■■□□ 2.73
SETBP1Q9Y6X0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SETBP1Q9Y6X0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 ID1-201ENST00000376105 1233 ntBASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
SETBP1Q9Y6X0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SETBP1Q9Y6X0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 AC138932.3-201ENST00000567634 1902 ntBASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC32.07■■■□□ 2.72
SETBP1Q9Y6X0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 KRT18P61-201ENST00000585825 1298 ntBASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
SETBP1Q9Y6X0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
SETBP1Q9Y6X0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
SETBP1Q9Y6X0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
SETBP1Q9Y6X0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
SETBP1Q9Y6X0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32.05■■■□□ 2.72
SETBP1Q9Y6X0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC32.05■■■□□ 2.72
SETBP1Q9Y6X0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
SETBP1Q9Y6X0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms