Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
CDC42BPBQ9Y5S2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
CDC42BPBQ9Y5S2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPBQ9Y5S2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPBQ9Y5S2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPBQ9Y5S2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC34.45■■■■□ 3.11
CDC42BPBQ9Y5S2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPBQ9Y5S2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC34.45■■■■□ 3.1
CDC42BPBQ9Y5S2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC34.44■■■■□ 3.1
CDC42BPBQ9Y5S2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC34.44■■■■□ 3.1
CDC42BPBQ9Y5S2 NT5C3AP1-201ENST00000394500 1012 ntBASIC34.44■■■■□ 3.1
CDC42BPBQ9Y5S2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
CDC42BPBQ9Y5S2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDC42BPBQ9Y5S2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC34.42■■■■□ 3.1
CDC42BPBQ9Y5S2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CDC42BPBQ9Y5S2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
CDC42BPBQ9Y5S2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC34.42■■■■□ 3.1
CDC42BPBQ9Y5S2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.41■■■■□ 3.1
CDC42BPBQ9Y5S2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
CDC42BPBQ9Y5S2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.4■■■■□ 3.1
CDC42BPBQ9Y5S2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
CDC42BPBQ9Y5S2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CDC42BPBQ9Y5S2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC34.39■■■■□ 3.1
CDC42BPBQ9Y5S2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
CDC42BPBQ9Y5S2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDC42BPBQ9Y5S2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDC42BPBQ9Y5S2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC34.38■■■■□ 3.09
CDC42BPBQ9Y5S2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC34.37■■■■□ 3.09
CDC42BPBQ9Y5S2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CDC42BPBQ9Y5S2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC34.37■■■■□ 3.09
CDC42BPBQ9Y5S2 TPRG1LP1-201ENST00000598702 760 ntBASIC34.37■■■■□ 3.09
CDC42BPBQ9Y5S2 RAP2CP1-201ENST00000605103 478 ntBASIC34.37■■■■□ 3.09
CDC42BPBQ9Y5S2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
CDC42BPBQ9Y5S2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDC42BPBQ9Y5S2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC34.36■■■■□ 3.09
CDC42BPBQ9Y5S2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC34.36■■■■□ 3.09
CDC42BPBQ9Y5S2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC34.36■■■■□ 3.09
CDC42BPBQ9Y5S2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDC42BPBQ9Y5S2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC34.36■■■■□ 3.09
CDC42BPBQ9Y5S2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
CDC42BPBQ9Y5S2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPBQ9Y5S2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPBQ9Y5S2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.34■■■■□ 3.09
CDC42BPBQ9Y5S2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CDC42BPBQ9Y5S2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC34.34■■■■□ 3.09
CDC42BPBQ9Y5S2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC34.33■■■■□ 3.09
CDC42BPBQ9Y5S2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDC42BPBQ9Y5S2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
CDC42BPBQ9Y5S2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC34.33■■■■□ 3.09
CDC42BPBQ9Y5S2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC34.33■■■■□ 3.09
CDC42BPBQ9Y5S2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms