Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 AC027612.3-201ENST00000413684 1047 ntBASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 AL031602.1-201ENST00000633169 911 ntBASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L4-201ENST00000566884 1269 ntBASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 AC022517.1-201ENST00000592429 346 ntBASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB7Q9Y5E2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 KRT18P5-201ENST00000436075 1291 ntBASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 AC123595.1-201ENST00000440769 1046 ntBASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 AC012414.1-201ENST00000556676 535 ntBASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 AL354811.1-201ENST00000610286 706 ntBASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB7Q9Y5E2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 AC010525.1-201ENST00000585559 441 ntBASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 MIR6084-201ENST00000622012 110 ntBASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDHB7Q9Y5E2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L2-201ENST00000561772 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L6-201ENST00000626483 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L1-201ENST00000627662 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L8-201ENST00000629013 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L3-201ENST00000630187 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L7-201ENST00000630678 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 DUX4L5-201ENST00000630834 1275 ntBASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB7Q9Y5E2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 OR2I1P-207ENST00000453522 948 ntBASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 IKBKGP1-201ENST00000612193 1073 ntBASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PCDHB7Q9Y5E2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHB7Q9Y5E2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
PCDHB7Q9Y5E2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms